Package: healthyR 0.2.2.9000

healthyR: Hospital Data Analysis Workflow Tools

Hospital data analysis workflow tools, modeling, and automations. This library provides many useful tools to review common administrative hospital data. Some of these include average length of stay, readmission rates, average net pay amounts by service lines just to name a few. The aim is to provide a simple and consistent verb framework that takes the guesswork out of everything.

Authors:Steven Sanderson [aut, cre, cph]

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healthyR.pdf |healthyR.html✨
healthyR/json (API)
NEWS

# Install 'healthyR' in R:

install.packages('healthyR', repos = c('https://spsanderson.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/spsanderson/healthyr/issues

Datasets:

dx_cc_mapping - Diagnosis to Condition Code Mapping file
px_cc_mapping - Procedure to Condition Code Mapping file

On CRAN:

analysis analytics healthcare healthyr

7.27 score 30 stars 1 packages 103 scripts 467 downloads 34 exports 139 dependencies

Last updated 8 months agofrom:f65be48dfb. Checks:5 OK, 3 NOTE. Indexed: yes.

Target	Result	Latest binary
Doc / Vignettes	OK	Feb 24 2025
R-4.5-win	NOTE	Feb 24 2025
R-4.5-mac	NOTE	Feb 24 2025
R-4.5-linux	NOTE	Feb 24 2025
R-4.4-win	OK	Feb 24 2025
R-4.4-mac	OK	Feb 24 2025
R-4.3-win	OK	Jan 25 2025
R-4.3-mac	OK	Feb 24 2025

Exports::=.data %>%as_label as_name category_counts_tbl color_blind diverging_bar_plt diverging_lollipop_plt enquo enquos expr gartner_magic_chart_plt hr_scale_color_colorblind hr_scale_fill_colorblind los_ra_index_plt los_ra_index_summary_tbl named_item_list opt_bin save_to_excel service_line_augment service_line_vec sql_left sql_mid sql_right sym syms top_n_tbl ts_alos_plt ts_census_los_daily_tbl ts_median_excess_plt ts_plt ts_readmit_rate_plt ts_signature_tbl

Dependencies:anytime askpass base64enc BH bit bit64 blob bslib cachem chron class cli clipr clock codetools colorspace cowplot cpp11 crayon crosstalk curl data.table DBI diagram digest dplyr evaluate fansi farver fastmap fontawesome forcats forecast fracdiff fs furrr future future.apply generics ggplot2 globals glue gower gsubfn gtable hardhat highr hms htmltools htmlwidgets httr ipred isoband jquerylib jsonlite KernSmooth knitr labeling later lattice lava lazyeval lifecycle listenv lmtest lubridate magrittr MASS Matrix memoise mgcv mime munsell nlme nnet numDeriv openssl padr parallelly pillar pkgconfig plogr plotly prettyunits prodlim progress progressr promises proto purrr quadprog quantmod R6 rappdirs RColorBrewer Rcpp RcppArmadillo RcppRoll readr recipes rlang rmarkdown rpart rsample RSQLite sass scales shape slider sparsevctrs sqldf SQUAREM stringi stringr survival sys tibble tidyr tidyselect timechange timeDate timetk tinytex tseries tsfeatures TTR tzdb urca utf8 vctrs viridisLite vroom warp withr writexl xfun xts yaml zoo

Getting Started with healthyR

Steven P. Sanderson II, MPH

Rendered fromgetting-started.Rmdusingknitr::rmarkdownon Feb 24 2025.

Last update: 2021-06-21
Started: 2020-10-08

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Counts by Category	category_counts_tbl
Provide Colorblind Compliant Colors	color_blind
Diverging Bar Chart	diverging_bar_plt
Diverging Lollipop Chart	diverging_lollipop_plt
Diagnosis to Condition Code Mapping file	dx_cc_mapping
Gartner Magic Chart - Plotting of two continuous variables	gartner_magic_chart_plt
Provide Colorblind Compliant Colors	hr_scale_color_colorblind
Provide Colorblind Compliant Colors	hr_scale_fill_colorblind
Plot LOS and Readmit Index with Variance	los_ra_index_plt
Make LOS and Readmit Index Summary Tibble	los_ra_index_summary_tbl
Tibble to named list	named_item_list
Get the optimal binwidth for a histogram	opt_bin
Procedure to Condition Code Mapping file	px_cc_mapping
Save a file to Excel	save_to_excel
Service Line Grouper Augment Function	service_line_augment
Service Line Grouper Vectorized Function	service_line_vec
Use SQL LEFT type function	sql_left
Use SQL MID type function	sql_mid
Use SQL RIGHT type functions	sql_right
Top N tibble	top_n_tbl
Plot ALOS - Average Length of Stay	ts_alos_plt
Time Series - Census and LOS by Day	ts_census_los_daily_tbl
Create a plot showing the excess of the median value	ts_median_excess_plt
Time Series Plot	ts_plt
Plot Readmit Rate	ts_readmit_rate_plt
Make a Time Enhanced Tibble	ts_signature_tbl